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<html><head><title>Some useful routines</title></head><body bgcolor=white><h1 align=center>Some useful routines from the library <font color=red>ddtsa</font></h1>This page shortly describes the routines which are included in thelibrary libddtsa.a. This library is created in the directory../../source_c/routines. The related header file is <ahref="../../source_c/routines/tsa.h">tsa.h</a><h3 align=center>Description of the routines</h3><ul><li><p><a href="../../source_c/routines/scan_help.c">int scan_help</a> <font color=red>(int argc,char **argv)</font><br> This routine just scans the options for a -h and returns a 1 if found and a 0 if not.</p></li><li><p><a href="../../source_c/routines/get_series.c">double *get_series</a> <font color=red>(char *name, unsigned long *l,unsigned long ex, unsigned int col, unsigned int verbosity)</font><br> This routine reads a scalar time series from the file <font color=red>name</font> into the array which is returned.<font color=red>l</font> is the number of data read (will on return be the minimum of the file size and the value given). The first <font color=red>ex</font> lines of the file are ignored and the time series is supposed to be the <font color=red>col</font>s column. <font color=red>verbosity</font> specifies the <a href=../general.html#verbosity>verbosity level</a> of the program.</p></li><li><p><a href="../../source_c/routines/get_multi_series.c"> double **get_multi_series</a><font color=red>(char *name, unsigned long *l,unsigned long ex, unsigned int *col, char *which,char colfix,unsigned int verbosity)</font><br> Reads a multivariate time series and returns a pointer to it. The first three parameters are the same as in <font color=red>get_series</font>. <font color=red>*col</font> is the number of columns to read and <font color=red>which</font> is a string which contains the <a href=../general.html#columns>columns to be read</a>, separated by commas. <font color=red>colfix</font> determines whether <font color=red>*col</font> can be modified within the routine.<br> Example: to read the first three columns: <font color=red>which=1,2,3</font> or if the columns should be permuted <font color=red>which=3,2,1</font> means: x=third column, ...<br> If <font color=red>which</font> contains less columns than specified in <font color=red>col</font> it is extended in such a way that columns are appended that are larger than the largest given in <font color=red>which</font>.<br> Example: <font color=red>col=3</font> <font color=red>which=1,2</font> -›<font color=red>which=1,2,3 </font> or <br> <font color=red>which=5,1</font> -›<font color=red>which=5,1,6 </font><br> If <font color=red>which</font> contains more columns than specified in <font color=red>*col</font>, then <font color=red>which</font> determines the number of columns to read unless the dimension was specified on the command line, explicitely. <font color=red>verbosity</font> specifies the <a href=../general.html#verbosity>verbosity level</a> of the program.</p></li><li><p><a href="../../source_c/routines/rescale_data.c">void rescale_data</a> <font color=red> (double *s,unsigned long l,double *min,double *interval)</font><br> This routine rescales the data in the array <font color=red>s</font>, which has a length <font color=red>l</font>, to the interval [0:1]. On return <font color=red>min</font> is the minimum of the original data set and <font color=red>interval</font> its original interval.</p></li><li><p><a href="../../source_c/routines/variance.c">void variance</a> <font color=red>(double *s, unsigned long l,double *av,double *var)</font><br> Simply calculates the average <font color=red>av</font> and the variance <font color=red>var</font> of a time series <font color=red>s</font>, which has length <font color=red>l</font>.</p></li><li><p><a href="../../source_c/routines/make_box.c">void make_box</a> <font color=red>(double *s,long **box,long *list, unsigned long l,unsigned int bs,unsigned int dim,unsigned int del,double eps)</font><br> This routine together with the routine <a href="../../source_c/routines/find_neighbors.c">find_neighbors</a> constitute the <a href="../chaospaper/citation.html#box-assisted"> box-assisted search algorithm</a>. The parameters are: The time series <font color=red>s</font> of length <font color=red>l</font>, a two dimensional <font color=red>box</font> of dimension <font color=red>bs</font>, where bs has to be a power of 2, the search <font color=red>list</font>, also of length <font color=red>l</font>, the dimension <font color=red>dim</font> of the embedding vectors, which are build with delay <font color=red>del</font> and the size <font color=red>eps</font> of the boxes.</p></li><li><p><a href="../../source_c/routines/find_neighbors.c"> unsigned long find_neighbors</a><font color=red> (double *s,long **box,long *list,double *x, unsigned long l,unsigned int bs,unsigned int dim, unsigned int del,double eps,unsigned long *flist)</font><br> This routine searches for all neighbors of a vector <font color=red>x</font> within the time series <font color=red>s</font>. The indexes of the neighbors found are stored in the array <font color=red>flist</font>, which has length <font color=red>l</font> and the number of neighbors found is returned. All other parameters have the same meaning as in the routine <a href="../../source_c/routines/make_box.c">make_box</a>.</p></li><li><p><a href="../../source_c/routines/search_datafile.c"> char* search_datafile</a><font color=red>(int n,char **names,unsinged int *col,unsigned int verbosity)</font><br> This routines gets an array of strings <font color=red>names</font> of size <font color=red>n</font> and scans it for a name of an existing file. It returns the filename in case it found one or a NULL pointer if not. If the filename is given like <i>filename,i</i> the <i>i</i> is interpreted as the column and is returned in <font color=red>col</font>, if <font color=red>col</font> was not a pointer to NULL. <font color=red>verbosity</font> specifies the <a href=../general.html#verbosity>verbosity level</a> of the program. </p></li><li><p><a href="../../source_c/routines/check_option.c">char* check_option</a> <font color=red>(char **str,int n,int flag,int type)</font><br> This routine looks for the flag <font color=red>flag</font> in the string array <font color=red>str</font> (typically argv) which has <font color=red>n</font> (typically argc) entries. The flag is supposed to be of type <font color=red>type</font>. See the sources for the valid types. The return string contains the parameter for the flag or NULL if none was found.</p></li><li><p><a href="../../source_c/routines/solvele.c"> void solvele</a><font color=red>(double **mat,double *vec,unsigned int dim)</font><br> Solves a <font color=red>dim</font>-dimensional system of linear equations given by <font color=red><b>mat</b></font>*<b>x</b>=<font color=red><b>vec</b></font>. It uses a Gaussian elimination scheme. On return <font color=red>vec</font> contains <b>x</b>.</p></li><li><p><a href="../../source_c/routines/test_outfile.c"> void test_outfile</a><font color=red>(char *name)</font><br> This routine just checks whether the program can write to the file named <font color=red>name</font>. If not the program exits.</p></li><li><p><a href="../../source_c/routines/invert_matrix.c"> double **invert_matrix</a> <font color=red>(double **mat,unsigned int size)</font><br> Inverts the matrix <font color=red>mat</font> which is <font color=red>size</font>x<font color=red>size</font>. It uses the routine <a href="../../source_c/routines/solvele.c">solvele</a>. The inverse matrix is returned.</p></li><li><p><a href="../../source_c/routines/exclude_interval.c"> unsigned long exclude_interval</a><font color=red>(unsigned long found,long ex0,long ex1,long *before,long *newlist)</font><br> This routine is meant to be used in connection with the <a href="../../source_c/routines/find_neighbors.c">find_neighbors</a> routine. After having found <font color=red>found</font> neighbors which are stored in <font color=red>before</font>, this new routine allows to exclude an interval of time indexes limited from <font color=red>ex0</font> to <font color=red>ex1</font> from this list. In other words: All neighbors having a time index in the above range are removed from the list. The modified list is returned in <font color=red>newlist</font> and the new number of neigbors is the return value of the routine.</p></li><li><p><a href="../../source_c/routines/make_multi_box.c">void make_multi_box</a><font color=red>(double **series,long**box,long *list,unsigned long length,unsigned int bs,unsigned intdim, unsigned int emb, unsigned int del,double eps)</font><br> Thisroutine is used to create the mesh for the box assisted searchalgorithm in case you have multivariate data. The parameter <fontcolor=red>dim</font> determines the number of components of thevector. All other parameter have the same meaning as in <ahref="../../source_c/routines/make_box.c">make_box</a>.</p></li><li><p><a href="../../source_c/routines/find_multi_neighbors.c"> unsigned long find_multi_neighbors</a><font color=red> (double *s,long **box,long *list,double **x, unsigned long l,unsigned int bs,unsigned int dim, unsigned int emb,unsigned int del,double eps,unsigned long *flist)</font><br> This routine searches for all neighbors of a multicomponent vector <font color=red>x</font> within the multicomponent time series <font color=red>s</font>. <font color=red>dim</font> is the number of components. All other parameters have the same meaning as the ones of <a href="../../source_c/routines/find_neighbors.c"> find_neighbors</a>.</p></li><li><p><a href="../../source_c/routines/make_multi_index.c">unsigned int **make_multi_index</a><font color=red>(unsigned int comps, unsigned int emb, unsigned int del)</font><br> This routine is supposed to help with multivariate series. Given a series with <font color=red>comps</font> components which are additionally embedded in <font color=red>emb</font> dimensions using delay <font color=red>del</font>, this routine returns a 2d array with the following property: Given a number between 0 and comps*emb-1, the first dimension of the returned array contains the component of the multivariate series, while the second dimension contains the time shift due to the embedding.</p></li><li><p><a href="../../source_c/routines/check_alloc.c">void check_alloc</a><font color=red>(void *array)</font><br> Just checks whether the pointer <font color=red>array</font> is NULL. If so, the routines exits with an error code. The routine is supposed to be used in combination with malloc from glibc.</p></li><li><p><a href="../../source_c/routines/myfgets.c">void myfgets</a><font color=red>(char *str,int *size,FILE *fin, unsigned int verbosity)</font><br> This routine wraps the fgets routine of C to handle looong input lines. The parameters have the same meaning as in fgets. The only differences are: <font color=red>size</font> can be changed inside and <font color=red>verbosity</font> handles the <a href=../general.html#verbosity>verbosity level</a> for the output of warnings.</p></li><li><p><a href="../../source_c/routines/what_i_do.c">void what_i_do</a><font color=red>(char *text,char *name)</font>: Just writes a message to stderr saying what the program <font color=red>name</font> does (<font color=red>text</font>).</p></li><li><p><a href="../../source_c/routines/rand_arb_dist.c">double *rand_arb_dist</a><font color=red>(double *x,unsigned long nx, unsigned long nc, unsigned int nb, unsigned long iseed)</font><br> This routine generates random numbers, which have the same distribution as the data set <font color=red>x</font>. The length of <font color=red>x</font> is <font color=red>nx</font>. The number of random numbers created is <font color=red>nc</font>. <font color=red>nb</font> is the number of boxes with which the original data is binned to define the histogram to be reproduced. <font color=red>iseed</font> gives the seed for the random number generator. The returned array finally contains the random numbers.</p></li><p><li>Some random number generator routines can be found <ahref="rand.html">here</a></li></p><li><p><a href="../../source_c/routines/eigen.c">void eigen</a><font color=red>(double **mat,unsigned long n, double *eig)</font><br> This routine calculates the eigenvectors and eigenvalues of a symmetric matrix <font color=red>mat</font> having dimension <font color=red>n</font>. On return <font color=red>mat</font> contains the eigenvectors of <font color=red>mat</font> as columns and <font color=red>eig</font> its eigenvalues. It uses the routines <font color=blue>tred2</font> and <font color=blue>tql2</font> of the EISPACK package which were translated to C using the f2c program. The routine requires <font color=red>mat</font> to be allocated in a special way. </p></li></ul></body></html>?? 快捷鍵說明
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