# makefile for hidden Markov model code.# modified by Arthur Stephens to add Solaris options## CC: uncomment the following for Solaris# CFLAGS = -c -O# CC = CC# GLIB =# SOLLIB = -L/usr/ucblib -lucb# the next three lines perform purify# PURIFY = /opt/purify3/purify-3.0-solaris2/purify# PURIFY_FLAGS = -best-effort -cache_dir=/tmp # PURE = $(PURIFY) $(PURIFY_FLAGS)## CC: end ## gcc: uncomment the following for gccCFLAGS = -c -O -D_random_h_  # ignore declarations in random.hCC = gccGLIB = -lg++SOLLIB =PURE =## gcc: endall : train_hmm test_hmm generate_seqtrain_hmm : hmm.o train_hmm.o	$(PURE) $(CC) -o train_hmm hmm.o train_hmm.o -lm $(SOLLIB) $(GLIB)test_hmm : hmm.o test_hmm.o	$(CC) -o test_hmm hmm.o test_hmm.o -lm $(SOLLIB) $(GLIB)generate_seq : hmm.o generate_seq.o	$(CC) -o generate_seq generate_seq.o hmm.o -lm $(SOLLIB) $(GLIB)	train_hmm.o : train_hmm.cc hmm.h	$(CC) $(CFLAGS) train_hmm.cctest_hmm.o : test_hmm.cc hmm.h	$(CC) $(CFLAGS) test_hmm.ccgenerate_seq.o : generate_seq.cc hmm.h	$(CC) $(CFLAGS) generate_seq.cc hmm.o : hmm.cc hmm.h 	$(CC) $(CFLAGS) hmm.cc clean : 	rm -f *.o core *.seq *.seq.hmm