?? som_autolabel.m
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function [sTo] = som_autolabel(sTo, sFrom, mode, inds)%SOM_AUTOLABEL Automatical labeling, or clearing of labels.%% sTo = som_autolabel(sTo, sFrom, [mode], [inds])%% sM = som_autolabel(sM,sD); % sD = som_autolabel(sD,sM); % sM = som_autolabel(sM,sD,'vote',[5]);%% Input and output arguments ([]'s are optional): % sTo (struct) data or map struct to which the labels are put,% the modified struct is returned% sFrom (struct) data or map struct from which the labels are taken% [mode] (string) labeling algorithm: 'add' (the default), 'freq' % or 'vote'% [inds] (vector) the column-indexes of the labels that are to be% used in the operation (e.g. [2] would mean to use% only the second column of labels array in sFrom) % % The modes:% 'add': all labels from sFrom are added to sTo (even multiple% copies of same) % 'add1': only one instance of each label is kept% 'freq': only one instance of each label is kept and '(#)', where % # is the frequency of the label, is added to the end of % the label. Labels are ordered according to frequency. % 'vote': only the label with most instances is kept%% NOTE: The operations are only performed for the new labels. % The old labels in sTo are left as they are.% NOTE: all empty labels ('') are ignored.%% For more help, try 'type som_autolabel' or check out online documentation.% See also SOM_LABEL, SOM_BMUS, SOM_SHOW_ADD, SOM_SHOW.%%%%%%%%%%%%% DETAILED DESCRIPTION %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% som_autolabel%% PURPOSE%% Automatically label to map/data structs based on given data/map.%% SYNTAX%% sTo = som_autolabel(sTo, sFrom)% sTo = som_autolabel(sTo, sFrom, 'add')% sTo = som_autolabel(sTo, sFrom, 'freq')% sTo = som_autolabel(sTo, sFrom, 'vote')% sTo = som_autolabel(..., inds)%% DESCRIPTION%% This function automatically labels given map/data struct based on an% already labelled data/map struct. Basically, the BMU of each vector in the% sFrom struct is found from among the vectors in sTo, and the vectors in% sFrom are added to the corresponding vector in the sTo struct. The actual% labels to add are selected based on the mode ('add', 'freq' or 'vote').%% 'add' : all labels from sFrom are added to sTo - even if there would % be multiple instances of the same label% 'add1' : only one instance of each label is kept% 'freq' : only one instance of each label is kept and '(#)', where % # is the frequency of the label, is added to the end of % the label. Labels are ordered according to frequency. % 'vote' : only the label with most instances is added%% Note that these operations do not effect the old labels of sTo: they % are left as they were. % % NOTE: empty labels ('') are ignored.%% REQUIRED INPUT ARGUMENTS%% sTo (struct) data or map struct to which the labels are put % sFrom (struct) data or map struct from which the labels are taken%% OPTIONAL INPUT ARGUMENTS %% mode (string) The mode of operation: 'add' (default), % 'add1', 'freq' or 'vote'% inds (vector) The columns of the '.labels' field in sFrom to be % used in operation%% OUTPUT ARGUMENTS% % sTo (struct) the given data/map struct with modified labels% % EXAMPLES%% To label a trained map based on (labelled) training data, just do%% sM = som_autolabel(sM,sD); %% This operation is sometimes called "calibration" in the literature.% You can also do this the other way around: use a labelled map to % label a data set: %% sD = som_autolabel(sD,sM); %% If you only want a single instance of each label, use the 'freq' mode: %% sM = som_autolabel(sM,sD,'freq');%% If you already have labels in the struct, and want to perform 'freq' on % them, do the following: %% sMtemp = som_label(sM,'clear','all'); % make a map struct with no labels% sM = som_autolabel(sMtemp,sM,'freq'); % add labels to it%% The third mode 'vote' votes between the labels and only adds the one% which is most frequent. If two labels are equally frequent, one or the% other is chosen based on which appears first in the list.%% sM = som_autolabel(sM,sD,'vote');%% The lat argument is useful if you have specific labels in each column% of the '.labels' field. For example, the first column might be an% identifier, the next a typecode and the last a year. In this case, you% might want to label the map based only on the typecode: % % sM = som_autolabel(sM,sD,'vote',2);%% SEE ALSO% % som_label Give/remove labels from a map/data set.% som_bmus Find BMUs from the map for the given set of data vectors.% som_show Show map planes.% som_show_add Add for example labels to the SOM_SHOW visualization.% Copyright (c) 1997-2000 by the SOM toolbox programming team.% http://www.cis.hut.fi/projects/somtoolbox/% Version 1.0beta juuso 101297 % Version 2.0beta juuso 101199%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% check argumentserror(nargchk(2, 4, nargin)); % check no. of input args is correct% sTotodata = strcmp(sTo.type,'som_data');% sFrom [dummy m] = size(sFrom.labels);% modeif nargin<3 | isempty(mode), mode = 'add'; end% indsif nargin<4, inds = 1:m; endinds = inds(find(inds>0 & inds<=m)); %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% get a list of the labels to be added to each vector% calculate BMUsif todata, bmus = som_bmus(sFrom,sTo,1);else bmus = som_bmus(sTo,sFrom,1); end% for each vector in sTo, make a list of all new labelsLabels = cell(size(sTo.labels,1),1);for d=1:length(bmus), m = bmus(d); if todata, t = d; f = m; else t = m; f = d; end if ~isnan(m), % add the labels for j=1:length(inds), if ~isempty(sFrom.labels{f,inds(j)}), Labels{t}{length(Labels{t})+1} = sFrom.labels{f,inds(j)}; end endend%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% insert the labels to sToif strcmp(mode,'add1') | strcmp(mode,'freq') | strcmp(mode,'vote'), % modify the Labels array apprpriately for i=1:length(Labels), % calculate frequency of each label in each node new_labels = {}; new_freq = []; for j=1:length(Labels{i}), if isempty(Labels{i}{j}), % ignore elseif ~any(strcmp(Labels{i}{j},new_labels)), % a new one! k = length(new_labels) + 1; new_labels{k} = Labels{i}{j}; new_freq(k) = sum(strcmp(new_labels{k},Labels{i})); else, % an old one, ignore end end % based on frequency, select label(s) to be added if length(new_labels) > 0, if strcmp(mode,'add1'), Labels{i} = new_labels; else % sort labels according to frequency [dummy order] = sort(1./(1+new_freq)); new_labels = new_labels(order); new_freq = new_freq(order); switch mode, case 'freq', % replace each label with 'label(#)' where # is the frequency for j=1:length(new_labels), labf = sprintf('%s(%d)',new_labels{j},new_freq(j)); new_labels{j} = labf; end Labels{i} = new_labels; case 'vote', % place only the one with most votes Labels{i} = {new_labels{1}}; end end end endendsTo = som_label(sTo,'add',[1:length(Labels)]',Labels);%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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