?? openbdf.m
字號(hào):
function [DAT,H1]=openbdf(FILENAME)% EDF=openedf(FILENAME)% Opens an EDF File (European Data Format for Biosignals) in MATLAB (R)% <A HREF="http://www.medfac.leidenuniv.nl/neurology/knf/kemp/edf.htm">About EDF</A> % Copyright (C) 1997-1998 by Alois Schloegl% a.schloegl@ieee.org% Ver 2.20 18.Aug.1998% Ver 2.21 10.Oct.1998% Ver 2.30 5.Nov.1998%% For use under Octave define the following function% function s=upper(s); s=toupper(s); end;% V2.12 Warning for missing Header information
% V2.20 EDF.AS.* changed
% V2.30 EDF.T0 made Y2K compatible until Year 2090
% This program is free software; you can redistribute it and/or% modify it under the terms of the GNU General Public License% as published by the Free Software Foundation; either version 2% of the License, or (at your option) any later version.% % This program is distributed in the hope that it will be useful,% but WITHOUT ANY WARRANTY; without even the implied warranty of% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the% GNU General Public License for more details.% % You should have received a copy of the GNU General Public License% along with this program; if not, write to the Free Software% Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.% Name changed Sept 6,2002 T.S. LorigSLASH='/'; % defines Seperator for SubdirectoriesBSLASH=setstr(92);cname=computer;if cname(1:2)=='PC' SLASH=BSLASH; end;fid=fopen(FILENAME,'r','ieee-le'); if fid<0 fprintf(2,['Error LOADEDF: File ' FILENAME ' not found\n']); return;end;EDF.FILE.FID=fid;EDF.FILE.OPEN = 1;EDF.FileName = FILENAME;PPos=min([max(find(FILENAME=='.')) length(FILENAME)+1]);SPos=max([0 find((FILENAME=='/') | (FILENAME==BSLASH))]);EDF.FILE.Ext = FILENAME(PPos+1:length(FILENAME));EDF.FILE.Name = FILENAME(SPos+1:PPos-1);if SPos==0 EDF.FILE.Path = pwd;else EDF.FILE.Path = FILENAME(1:SPos-1);end;EDF.FileName = [EDF.FILE.Path SLASH EDF.FILE.Name '.' EDF.FILE.Ext];H1=setstr(fread(EDF.FILE.FID,256,'char')'); %EDF.VERSION=H1(1:8); % 8 Byte Versionsnummer %if 0 fprintf(2,'LOADEDF: WARNING Version EDF Format %i',ver); end;EDF.PID = deblank(H1(9:88)); % 80 Byte local patient identificationEDF.RID = deblank(H1(89:168)); % 80 Byte local recording identification%EDF.H.StartDate = H1(169:176); % 8 Byte %EDF.H.StartTime = H1(177:184); % 8 Byte EDF.T0=[str2num(H1(168+[7 8])) str2num(H1(168+[4 5])) str2num(H1(168+[1 2])) str2num(H1(168+[9 10])) str2num(H1(168+[12 13])) str2num(H1(168+[15 16])) ];
% Y2K compatibility until year 2090
if EDF.VERSION(1)=='0'
if EDF.T0(1) < 91
EDF.T0(1)=2000+EDF.T0(1);
else
EDF.T0(1)=1900+EDF.T0(1);
end;
else ;
% in a future version, this is hopefully not needed
end;
EDF.HeadLen = str2num(H1(185:192)); % 8 Byte Length of Header% reserved = H1(193:236); % 44 Byte EDF.NRec = str2num(H1(237:244)); % 8 Byte # of data recordsEDF.Dur = str2num(H1(245:252)); % 8 Byte # duration of data record in secEDF.NS = str2num(H1(253:256)); % 8 Byte # of signalsEDF.Label = setstr(fread(EDF.FILE.FID,[16,EDF.NS],'char')'); EDF.Transducer = setstr(fread(EDF.FILE.FID,[80,EDF.NS],'char')'); EDF.PhysDim = setstr(fread(EDF.FILE.FID,[8,EDF.NS],'char')'); EDF.PhysMin= str2num(setstr(fread(EDF.FILE.FID,[8,EDF.NS],'char')')); EDF.PhysMax= str2num(setstr(fread(EDF.FILE.FID,[8,EDF.NS],'char')')); EDF.DigMin = str2num(setstr(fread(EDF.FILE.FID,[8,EDF.NS],'char')')); % EDF.DigMax = str2num(setstr(fread(EDF.FILE.FID,[8,EDF.NS],'char')')); % % check validity of DigMin and DigMaxif (length(EDF.DigMin) ~= EDF.NS) fprintf(2,'Warning OPENEDF: Failing Digital Minimum\n'); EDF.DigMin = -(2^15)*ones(EDF.NS,1);endif (length(EDF.DigMax) ~= EDF.NS) fprintf(2,'Warning OPENEDF: Failing Digital Maximum\n'); EDF.DigMax = (2^15-1)*ones(EDF.NS,1);endif (any(EDF.DigMin >= EDF.DigMax)) fprintf(2,'Warning OPENEDF: Digital Minimum larger than Maximum\n');end % check validity of PhysMin and PhysMaxif (length(EDF.PhysMin) ~= EDF.NS) fprintf(2,'Warning OPENEDF: Failing Physical Minimum\n'); EDF.PhysMin = EDF.DigMin;endif (length(EDF.PhysMax) ~= EDF.NS) fprintf(2,'Warning OPENEDF: Failing Physical Maximum\n'); EDF.PhysMax = EDF.DigMax;endif (any(EDF.PhysMin >= EDF.PhysMax)) fprintf(2,'Warning OPENEDF: Physical Minimum larger than Maximum\n'); EDF.PhysMin = EDF.DigMin; EDF.PhysMax = EDF.DigMax;end EDF.PreFilt= setstr(fread(EDF.FILE.FID,[80,EDF.NS],'char')'); % tmp = fread(EDF.FILE.FID,[8,EDF.NS],'char')'; % samples per data recordEDF.SPR = str2num(setstr(tmp)); % samples per data recordfseek(EDF.FILE.FID,32*EDF.NS,0);EDF.Cal = (EDF.PhysMax-EDF.PhysMin)./ ... (EDF.DigMax-EDF.DigMin);EDF.Off = EDF.PhysMin - EDF.Cal .* EDF.DigMin;tmp = find(EDF.Cal < 0);EDF.Cal(tmp) = ones(size(tmp));EDF.Off(tmp) = zeros(size(tmp));EDF.Calib=[EDF.Off';(diag(EDF.Cal))];%EDF.Calib=sparse(diag([1; EDF.Cal]));%EDF.Calib(1,2:EDF.NS+1)=EDF.Off';EDF.SampleRate = EDF.SPR / EDF.Dur;EDF.FILE.POS = ftell(EDF.FILE.FID);if EDF.NRec == -1 % unknown record size, determine correct NRec fseek(EDF.FILE.FID, 0, 'eof'); endpos = ftell(EDF.FILE.FID); EDF.NRec = floor((endpos - EDF.FILE.POS) / (sum(EDF.SPR) * 2)); fseek(EDF.FILE.FID, EDF.FILE.POS, 'bof'); H1(237:244)=sprintf('%-8i',EDF.NRec); % write number of records
end; EDF.Chan_Select=(EDF.SPR==max(EDF.SPR));for k=1:EDF.NS if EDF.Chan_Select(k) EDF.ChanTyp(k)='N'; else EDF.ChanTyp(k)=' '; end; if findstr(upper(EDF.Label(k,:)),'ECG') EDF.ChanTyp(k)='C'; elseif findstr(upper(EDF.Label(k,:)),'EKG') EDF.ChanTyp(k)='C'; elseif findstr(upper(EDF.Label(k,:)),'EEG') EDF.ChanTyp(k)='E'; elseif findstr(upper(EDF.Label(k,:)),'EOG') EDF.ChanTyp(k)='O'; elseif findstr(upper(EDF.Label(k,:)),'EMG') EDF.ChanTyp(k)='M'; end;end;EDF.AS.spb = sum(EDF.SPR); % Samples per Blockbi=[0;cumsum(EDF.SPR)];
idx=[];idx2=[];for k=1:EDF.NS, idx2=[idx2, (k-1)*max(EDF.SPR)+(1:EDF.SPR(k))];end;
maxspr=max(EDF.SPR);idx3=zeros(EDF.NS*maxspr,1);
for k=1:EDF.NS, idx3(maxspr*(k-1)+(1:maxspr))=bi(k)+ceil((1:maxspr)'/maxspr*EDF.SPR(k));end;
%EDF.AS.bi=bi;
EDF.AS.IDX2=idx2;%EDF.AS.IDX3=idx3;
DAT.Head=EDF; DAT.MX.ReRef=1;%DAT.MX=feval('loadxcm',EDF);return;
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