?? quick.c.txt
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#include <stdlib.h>
#include <stdio.h>
#include <time.h>
#include <math.h>
#include "mpi.h"
int myRank;
int mySize;
const int SingleArrayLength=10000000;
const int MaxArrayElement=1000000;
const int MinArrayElement=100;
int* myArray;
const int WorkerNumber=7;
const int SampleOffset=SingleArrayLength/WorkerNumber;
const int StartSampleOffset=WorkerNumber/2-1;
int* sampleArray;
int**mergeBuf;
MPI_Request* sampleRequests;
const int SAMPLE=100;
const int PIVOT=101;
const int MaxIntegerPrintLength=10;
void myExit()
{
//printf("\n\nrank %d finishes\n", myRank);
}
void printArray(int* array, int length, char* comment="Array print out:");
void printArray(int* array, int length, char* comment)
{
char* buf;
char temp[MaxIntegerPrintLength];
int commentLength=0;
commentLength=strlen(comment)+5;
buf=new char[length*MaxIntegerPrintLength+commentLength];
sprintf(buf, "rank[%d] %s:*****", myRank, comment);
for (int i=0; i<length; i++)
{
sprintf(temp, "%d,", array[i]);
strcat(buf, temp);
}
strcat(buf, "\n");
printf(buf);
delete []buf;
}
void initialize()
{
int i;
atexit(myExit);
srand(myRank*time(0));
if (myRank==0)
{
sampleArray=new int[WorkerNumber*WorkerNumber];
sampleRequests=new MPI_Request[WorkerNumber];
myArray=new int[SingleArrayLength*WorkerNumber];
mergeBuf=new int*[WorkerNumber];
for (i=0; i<WorkerNumber; i++)
{
mergeBuf[i]=new int[SingleArrayLength];
}
}
else
{
sampleArray=new int[WorkerNumber];
sampleRequests=new MPI_Request[1];
//srand(time(0));
myArray=new int[SingleArrayLength];
for (i=0; i<SingleArrayLength; i++)
{
myArray[i]=rand()%MaxArrayElement+MinArrayElement;
}
}
}
int intComp(const void* first, const void* second)
{
return *(int*)first - *(int*)second;
}
void zeroPhase()
{
int i;
double start, end;
if (myRank==0)
{
for (i=0; i<WorkerNumber; i++)
{
sampleRequests[i]=MPI_REQUEST_NULL;
MPI_Irecv(myArray+i*SingleArrayLength, SingleArrayLength, MPI_INT, i+1, 0, MPI_COMM_WORLD, sampleRequests+i);
}
MPI_Waitall(WorkerNumber, sampleRequests, MPI_STATUSES_IGNORE);
start=MPI_Wtime();
qsort(myArray, WorkerNumber*SingleArrayLength, sizeof(int), intComp);
end=MPI_Wtime();
printf("single machine sorting array of length %d takes %f\n",SingleArrayLength*WorkerNumber, end-start);
}
else
{
MPI_Send(myArray, SingleArrayLength, MPI_INT, 0, 0, MPI_COMM_WORLD);
}
}
void firstPhase()
{
if (myRank!=0)
{
qsort(myArray, SingleArrayLength, sizeof(int), intComp);
//printArray(myArray, SingleArrayLength, "worker data array print out");
//retrieve samples
for (int i=0; i<WorkerNumber; i++)
{
sampleArray[i]=myArray[i*SampleOffset];
}
}
}
void secondPhase()
{
int i;
if (myRank==0)
{
for (i=0; i<WorkerNumber; i++)
{
MPI_Irecv(sampleArray+i*WorkerNumber, WorkerNumber, MPI_INT, i+1, SAMPLE, MPI_COMM_WORLD, sampleRequests+i);
//MPI_Recv(sampleArray+i*WorkerNumber, WorkerNumber, MPI_INT, i+1, SAMPLE, MPI_COMM_WORLD, MPI_STATUS_IGNORE);
}
MPI_Waitall(WorkerNumber, sampleRequests, MPI_STATUSES_IGNORE);
qsort(sampleArray, WorkerNumber*WorkerNumber, sizeof(int), intComp);
//printArray(myArray, SingleArrayLength, "worker's data array\n");
/*
for (i=0; i<WorkerNumber*WorkerNumber; i++)
{
printf("sample[%d]=%d\n", i, sampleArray[i]);
}
*/
//printArray(sampleArray, WorkerNumber*WorkerNumber);
for (i=1; i<WorkerNumber; i++)
{
sampleArray[i-1]=sampleArray[WorkerNumber*i+StartSampleOffset];
}
MPI_Bcast(sampleArray, WorkerNumber-1, MPI_INT, 0, MPI_COMM_WORLD);
//printArray(sampleArray, WorkerNumber-1, "this is the sampel data broadcasted");
}
else
{
MPI_Ssend(sampleArray, WorkerNumber, MPI_INT, 0, SAMPLE, MPI_COMM_WORLD);
MPI_Bcast(sampleArray, WorkerNumber-1, MPI_INT, 0, MPI_COMM_WORLD);
}
/*
for (i=0; i<WorkerNumber-1; i++)
{
printf("rank[%d][%d]=%d\n", myRank, i, sampleArray[i]);
}
*/
}
//it returns the smallest index of which the number is bigger than or equal to the key
int binarySearch(int key, int* array, int length)
{
int front=0, end=length-1;
if (key>array[end])
{
return length;
}
if (key<array[front])
{
return 0;
}
int pos=(front+end+1)/2;;
while (front<=end)
{
if (key>array[pos])
{
front=pos+1;
}
else
{
if (key<array[pos])
{
end=pos-1;
}
else
{
break;
}
}
pos=(front+end+1)/2;
}
return pos;
}
void thirdPhase()
{
int i, flag;
//do binary search
if (myRank!=0)
{
for (i=0; i<WorkerNumber-1; i++)
{
//printf("rank[%d]key=%d\n", myRank, sampleArray[i]);
sampleArray[i]=binarySearch(sampleArray[i], myArray, SingleArrayLength);
//printf("rank[%d][%d]=%d and the data myArray[%d]=%d\n", myRank, i, sampleArray[i],sampleArray[i], myArray[sampleArray[i]] );//for testing
//printf("before %d and after %d \n", myArray[sampleArray[i]-1], myArray[sampleArray[i]+1]);
}
sampleArray[WorkerNumber-1]=SingleArrayLength;
MPI_Ssend(sampleArray, WorkerNumber, MPI_INT, 0, PIVOT, MPI_COMM_WORLD);
//printArray(sampleArray, WorkerNumber, "worker sampleArray print out in third phase");
}
else
{
for (i=0; i<WorkerNumber; i++)
{
sampleRequests[i]=MPI_REQUEST_NULL;
MPI_Irecv(sampleArray+i*WorkerNumber, WorkerNumber, MPI_INT, i+1, PIVOT, MPI_COMM_WORLD, sampleRequests+i);
//MPI_Recv(sampleArray+i*WorkerNumber, WorkerNumber, MPI_INT, i+1, PIVOT, MPI_COMM_WORLD, MPI_STATUS_IGNORE);
//sampleArray[(i+1)*WorkerNumber]=WorkerNumber;
}
//printArray(sampleArray, WorkerNumber*WorkerNumber, "master sampleArray print out in third phase");
MPI_Waitall(WorkerNumber, sampleRequests, MPI_STATUSES_IGNORE);
/*
for (i=0; i<WorkerNumber*WorkerNumber; i++)
{
printf("sample[%d]=%d\n", i, sampleArray[i]);
}
*/
}
}
void doMerge(int** mergeBuf, int* lengthArray,int& currentPos)
{
int indexArray[WorkerNumber];
int i, candidate, candidateIndex;
bool beFirst=true, allOver=false;
for (i=0; i<WorkerNumber; i++)
{
indexArray[i]=0;
}
do
{
beFirst=true;
allOver=true;
for (i=0; i<WorkerNumber; i++)
{
if (indexArray[i]<lengthArray[i])
{
allOver=false;
if (beFirst)
{
beFirst=false;
candidate=mergeBuf[i][indexArray[i]];
candidateIndex=i;
}
else
{
if (candidate>mergeBuf[i][indexArray[i]])
{
candidate=mergeBuf[i][indexArray[i]];
candidateIndex=i;
}
}
}
}
if (allOver)
{
break;
}
myArray[currentPos]=candidate;
currentPos++;
indexArray[candidateIndex]++;
}
while (true);
}
void fourthPhase()
{
int i, j, flag;
int* sizePtr;
int* dataPtr;
int currentPos=0;
int previous, current;
int length;
//MPI_Request* tempRequests;
int lengthArray[WorkerNumber];
if (myRank==0)
{
//tempRequests=new MPI_Request[WorkerNumber*WorkerNumber];
//printArray(sampleArray, WorkerNumber*WorkerNumber, "before 4th phase, let' see sample Array\n");
for (i=0; i<WorkerNumber; i++)//the index of worker node
{
for (j=0; j<WorkerNumber; j++)//the index within worker node index
{
sizePtr=sampleArray+j*WorkerNumber+i;
if (i==0)
{
previous=0;
current=*sizePtr;
}
else
{
if (i==WorkerNumber-1)
{
current=SingleArrayLength;
}
else
{
current=*sizePtr;
}
previous=*(sampleArray+j*WorkerNumber+i-1);
}
//printf("\n current=%d, previous=%d\n", current, previous);
lengthArray[j]=current - previous;
//currentPos+=length;
//dataPtr=myArray+currentPos;
sampleRequests[j]=MPI_REQUEST_NULL;
//printf("\nmaster begins\n");
if (lengthArray[j]>0)
{
//MPI_Irecv(dataPtr, length, MPI_INT, j+1, j*10+i, MPI_COMM_WORLD, tempRequests+j*WorkerNumber+i);
//printf("\nmaster begin to recv data from rank %d of length %d\n", j+1, lengthArray[j]);
MPI_Irecv(mergeBuf[j], lengthArray[j], MPI_INT, j+1, j*10+i, MPI_COMM_WORLD, sampleRequests+j);
//MPI_Recv(mergeBuf[j], lengthArray[j], MPI_INT, j+1, j*10+i, MPI_COMM_WORLD, MPI_STATUS_IGNORE);
}
//printf("\nmaster after prints\n");
}
MPI_Waitall(WorkerNumber, sampleRequests, MPI_STATUSES_IGNORE);
doMerge(mergeBuf, lengthArray, currentPos);
/*
printf("\nmaster after tests of %d\n", i+1 );
for (int k=0; k<WorkerNumber; k++)
{
//printf("\nmaster going to print %d\n", lengthArray[k]);
if (lengthArray[k]>0)
{
printArray(mergeBuf[k], lengthArray[k], "Master receive segment");
}
}
*/
}
//MPI_Testall(WorkerNumber*WorkerNumber, tempRequests, &flag, MPI_STATUSES_IGNORE);
}
else
{
for (i=0; i<WorkerNumber; i++)
{
sizePtr=sampleArray+i;
if (i==0)
{
previous=0;
current=*sizePtr;
}
else
{
if (i==WorkerNumber-1)
{
current=SingleArrayLength;
}
else
{
current=*sizePtr;
}
previous=*(sampleArray+i-1);
}
dataPtr=myArray+previous;
length=current-previous;
currentPos+=length;
if (length>0)
{
//printArray(dataPtr, length, "going to send segment");
MPI_Send(dataPtr, length, MPI_INT, 0, (myRank-1)*10+i, MPI_COMM_WORLD);
}
}
}
}
void testArray()
{
int previous=myArray[0], current=myArray[0];
for (int i=1; i<WorkerNumber*SingleArrayLength; i++)
{
current=myArray[i];
if (current<previous)
{
printf("sorting error at %d with %d > %d\n", i, previous, current);
//exit(4);
}
previous=current;
//printf("rank[%d][%d]=%d\n", myRank, i, myArray[i]);
}
}
int main(int argc, char** argv)
{
double start, end;
MPI_Init(&argc, &argv);
MPI_Comm_rank(MPI_COMM_WORLD, &myRank);
MPI_Comm_size(MPI_COMM_WORLD, &mySize);
initialize();
zeroPhase();
if (myRank==0)
{
start=MPI_Wtime();
}
firstPhase();
//printf("\nfirst phase ends\n");
secondPhase();
//printf("\nsecond phase ends\n");
thirdPhase();
//printf("\nthird phase ends\n");
fourthPhase();
//printf("\nfourth phase ends\n");
if (myRank==0)
{
end=MPI_Wtime();
printf("distributing system sorting takes %f\n", end-start);
}
return 0;
}
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